Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AL512638.1-201ENST00000457493 794 ntBASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AC004840.1-201ENST00000636359 365 ntBASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC50Q8IVM0 AC022144.1-201ENST00000602255 1580 ntBASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 FAM86LP-201ENST00000478302 853 ntBASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC104794.3-201ENST00000566840 1248 ntBASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC50Q8IVM0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AC055876.3-201ENST00000431496 288 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AL049840.4-201ENST00000602422 811 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AC107373.2-201ENST00000607735 490 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms