Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.3□□□□□ -0.28
RTTNQ86VV8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AC026740.1-201ENST00000607068 791 ntBASIC13.29□□□□□ -0.28
RTTNQ86VV8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AC013726.1-201ENST00000563747 2285 ntBASIC13.29□□□□□ -0.28
RTTNQ86VV8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 GPAA1P2-201ENST00000417923 928 ntBASIC13.29□□□□□ -0.28
RTTNQ86VV8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 MYO15B-237ENST00000642007 4893 ntBASIC13.29□□□□□ -0.28
RTTNQ86VV8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.29□□□□□ -0.28
RTTNQ86VV8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTTNQ86VV8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CALR4P-201ENST00000431943 946 ntBASIC13.28□□□□□ -0.28
RTTNQ86VV8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AL009178.2-201ENST00000597278 2719 ntBASIC13.28□□□□□ -0.28
RTTNQ86VV8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms