Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST3H2AQ7L7L0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 AC018529.2-202ENST00000611482 3087 ntBASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST3H2AQ7L7L0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HIST3H2AQ7L7L0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 INTS4P2-202ENST00000614726 2019 ntBASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 C1QBPP1-201ENST00000400117 770 ntBASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AC087499.6-201ENST00000411576 835 ntBASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 CYMP-203ENST00000474680 1263 ntBASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AC120045.2-201ENST00000567334 178 ntBASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 BRI3BPP1-201ENST00000594224 787 ntBASIC13.7□□□□□ -0.22
HIST3H2AQ7L7L0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms