Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NUS1P3-201ENST00000423502 862 ntBASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 AL096828.3-201ENST00000615354 462 ntBASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 AC244452.3-201ENST00000636814 210 ntBASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 PRSS30P-206ENST00000641773 873 ntBASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC144BQ3MJ40 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AC079781.5-202ENST00000641784 3743 ntBASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AC004945.1-201ENST00000416738 983 ntBASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AC004898.1-201ENST00000451057 766 ntBASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AKR7A2P1-201ENST00000460134 915 ntBASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 ACE3P-201ENST00000423435 1973 ntBASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC144BQ3MJ40 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 SLC25A24P2-201ENST00000415059 510 ntBASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 CNN2P10-201ENST00000443067 918 ntBASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 IGHJ2P-201ENST00000454480 60 ntBASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms