Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 MBLAC2-202ENST00000514906 1936 ntBASIC12.85□□□□□ -0.35
ABCA4P78363 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
ABCA4P78363 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.85□□□□□ -0.35
ABCA4P78363 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 AL138725.1-201ENST00000407347 1314 ntBASIC12.85□□□□□ -0.35
ABCA4P78363 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.85□□□□□ -0.35
ABCA4P78363 PGAM1P5-201ENST00000548011 764 ntBASIC12.85□□□□□ -0.35
ABCA4P78363 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.85□□□□□ -0.35
ABCA4P78363 DNM1P30-201ENST00000563586 452 ntBASIC12.85□□□□□ -0.35
ABCA4P78363 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ABCA4P78363 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.85□□□□□ -0.35
ABCA4P78363 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ABCA4P78363 AC234644.1-201ENST00000406065 370 ntBASIC12.85□□□□□ -0.35
ABCA4P78363 AC010141.1-201ENST00000411585 623 ntBASIC12.85□□□□□ -0.35
ABCA4P78363 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.85□□□□□ -0.35
ABCA4P78363 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
ABCA4P78363 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ABCA4P78363 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ABCA4P78363 AL118508.1-201ENST00000613502 2345 ntBASIC12.84□□□□□ -0.35
ABCA4P78363 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 AP005117.1-202ENST00000581724 1908 ntBASIC12.84□□□□□ -0.35
ABCA4P78363 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.84□□□□□ -0.35
ABCA4P78363 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.84□□□□□ -0.35
ABCA4P78363 AC021723.1-201ENST00000486306 515 ntBASIC12.84□□□□□ -0.35
ABCA4P78363 RCC2P8-201ENST00000502779 1035 ntBASIC12.84□□□□□ -0.35
ABCA4P78363 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.84□□□□□ -0.35
ABCA4P78363 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA4P78363 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.84□□□□□ -0.35
ABCA4P78363 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ABCA4P78363 AC136621.1-201ENST00000624017 2304 ntBASIC12.84□□□□□ -0.35
ABCA4P78363 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.84□□□□□ -0.35
ABCA4P78363 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ABCA4P78363 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms