Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ACTA1P68133 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ACTA1P68133 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ACTA1P68133 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.38□□□□□ -0.27
ACTA1P68133 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ACTA1P68133 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ACTA1P68133 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.38□□□□□ -0.27
ACTA1P68133 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
ACTA1P68133 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ACTA1P68133 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ACTA1P68133 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ACTA1P68133 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ACTA1P68133 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ACTA1P68133 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.37□□□□□ -0.27
ACTA1P68133 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 NUS1P3-201ENST00000423502 862 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 CNN2P11-201ENST00000429351 262 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.37□□□□□ -0.27
ACTA1P68133 DNAJB3-202ENST00000449667 1266 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 ZNF890P-202ENST00000530367 1156 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.37□□□□□ -0.27
ACTA1P68133 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
ACTA1P68133 AC092337.1-201ENST00000568699 1129 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 AL138828.2-201ENST00000615812 383 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 AL158212.4-201ENST00000624062 1286 ntBASIC13.37□□□□□ -0.27
ACTA1P68133 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ACTA1P68133 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ACTA1P68133 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.37□□□□□ -0.27
ACTA1P68133 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ACTA1P68133 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ACTA1P68133 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms