Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC015818.8-201ENST00000587907 1519 ntBASIC15.01□□□□□ -0.01
AP1S1P61966 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.01□□□□□ -0.01
AP1S1P61966 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.01□□□□□ -0.01
AP1S1P61966 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
AP1S1P61966 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S1P61966 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15□□□□□ -0.01
AP1S1P61966 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
AP1S1P61966 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 AC010141.1-201ENST00000411585 623 ntBASIC15□□□□□ -0.01
AP1S1P61966 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15□□□□□ -0.01
AP1S1P61966 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15□□□□□ -0.01
AP1S1P61966 ACR-203ENST00000529621 708 ntTSL 5 BASIC15□□□□□ -0.01
AP1S1P61966 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15□□□□□ -0.01
AP1S1P61966 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP1S1P61966 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15□□□□□ -0.01
AP1S1P61966 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15□□□□□ -0.01
AP1S1P61966 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S1P61966 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15□□□□□ -0.01
AP1S1P61966 AL161772.1-201ENST00000610494 4412 ntBASIC14.99□□□□□ -0.01
AP1S1P61966 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
AP1S1P61966 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AP1S1P61966 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
AP1S1P61966 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.99□□□□□ -0.01
AP1S1P61966 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.99□□□□□ -0.01
AP1S1P61966 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.99□□□□□ -0.01
AP1S1P61966 MTX1P1-201ENST00000440904 838 ntBASIC14.99□□□□□ -0.01
AP1S1P61966 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.99□□□□□ -0.01
AP1S1P61966 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.99□□□□□ -0.01
AP1S1P61966 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 FAM86HP-204ENST00000513466 959 ntBASIC14.99□□□□□ -0.01
AP1S1P61966 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.99□□□□□ -0.01
AP1S1P61966 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.99□□□□□ -0.01
AP1S1P61966 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 AP001002.3-201ENST00000623482 206 ntBASIC14.99□□□□□ -0.01
AP1S1P61966 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 OR2I1P-209ENST00000641730 5365 ntBASIC14.99□□□□□ -0.01
AP1S1P61966 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
AP1S1P61966 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.99□□□□□ -0.01
AP1S1P61966 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
AP1S1P61966 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S1P61966 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S1P61966 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S1P61966 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S1P61966 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S1P61966 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S1P61966 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S1P61966 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.98□□□□□ -0.01
AP1S1P61966 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms