Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.27□□□□□ -0.45
SPCS3P61009 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SPCS3P61009 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 TPT1P11-201ENST00000458482 498 ntBASIC12.27□□□□□ -0.45
SPCS3P61009 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 AP000344.2-201ENST00000512987 629 ntBASIC12.27□□□□□ -0.45
SPCS3P61009 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.27□□□□□ -0.45
SPCS3P61009 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.27□□□□□ -0.45
SPCS3P61009 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.27□□□□□ -0.45
SPCS3P61009 AC004835.2-201ENST00000603762 682 ntBASIC12.27□□□□□ -0.45
SPCS3P61009 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.27□□□□□ -0.45
SPCS3P61009 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SPCS3P61009 AF228730.6-201ENST00000641497 218 ntBASIC12.27□□□□□ -0.45
SPCS3P61009 AC084121.3-201ENST00000641716 218 ntBASIC12.27□□□□□ -0.45
SPCS3P61009 LINC01230-201ENST00000625222 3017 ntBASIC12.27□□□□□ -0.45
SPCS3P61009 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.27□□□□□ -0.45
SPCS3P61009 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SPCS3P61009 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.27□□□□□ -0.45
SPCS3P61009 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.27□□□□□ -0.45
SPCS3P61009 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS3P61009 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SPCS3P61009 AL118506.1-201ENST00000601296 3082 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 NUTM2HP-201ENST00000442076 2498 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 AL080243.2-201ENST00000418783 582 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 DNAJB3-201ENST00000446806 729 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS3P61009 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS3P61009 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS3P61009 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS3P61009 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS3P61009 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 AC009093.7-201ENST00000623853 1223 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.26□□□□□ -0.45
SPCS3P61009 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 AP001267.2-201ENST00000532619 2086 ntBASIC12.26□□□□□ -0.45
SPCS3P61009 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SPCS3P61009 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS3P61009 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS3P61009 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SPCS3P61009 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms