Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN6P56747 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 RN7SKP230-201ENST00000365642 335 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 AC010141.1-201ENST00000411585 623 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.31□□□□□ -0.12
CLDN6P56747 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN6P56747 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.31□□□□□ -0.12
CLDN6P56747 PGAM1P5-201ENST00000548011 764 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN6P56747 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 MEG3_2.1-201ENST00000611456 105 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN6P56747 AL603764.1-201ENST00000636452 321 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 FAM90A7P-201ENST00000382628 1395 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 FAM90A23P-201ENST00000400136 1395 ntBASIC14.31□□□□□ -0.12
CLDN6P56747 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN6P56747 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN6P56747 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN6P56747 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN6P56747 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN6P56747 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN6P56747 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 RN7SL67P-201ENST00000492147 296 ntBASIC14.3□□□□□ -0.12
CLDN6P56747 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN6P56747 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 AC007881.3-201ENST00000608897 607 ntBASIC14.3□□□□□ -0.12
CLDN6P56747 AC242376.2-201ENST00000619355 883 ntBASIC14.3□□□□□ -0.12
CLDN6P56747 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 AC074138.1-201ENST00000611182 1303 ntBASIC14.3□□□□□ -0.12
CLDN6P56747 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN6P56747 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms