Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.23■□□□□ 0.03
CDH4P55283 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH4P55283 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH4P55283 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH4P55283 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH4P55283 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH4P55283 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH4P55283 AL096828.3-201ENST00000615354 462 ntBASIC15.23■□□□□ 0.03
CDH4P55283 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH4P55283 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH4P55283 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH4P55283 TNRC18P2-201ENST00000417666 2714 ntBASIC15.23■□□□□ 0.03
CDH4P55283 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 CICP14-201ENST00000629111 2732 ntBASIC15.22■□□□□ 0.03
CDH4P55283 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH4P55283 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH4P55283 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH4P55283 DUX4L46-201ENST00000566845 751 ntBASIC15.22■□□□□ 0.03
CDH4P55283 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 AC005695.3-201ENST00000614522 232 ntBASIC15.22■□□□□ 0.03
CDH4P55283 MIR6799-201ENST00000620297 69 ntBASIC15.22■□□□□ 0.03
CDH4P55283 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH4P55283 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CDH4P55283 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH4P55283 AC126755.1-201ENST00000525846 6405 ntBASIC15.21■□□□□ 0.03
CDH4P55283 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH4P55283 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH4P55283 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH4P55283 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH4P55283 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH4P55283 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH4P55283 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH4P55283 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH4P55283 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH4P55283 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH4P55283 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH4P55283 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.21■□□□□ 0.03
CDH4P55283 AC108725.1-201ENST00000495472 409 ntBASIC15.21■□□□□ 0.03
CDH4P55283 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH4P55283 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH4P55283 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CDH4P55283 FAM8A2P-201ENST00000528813 1142 ntBASIC15.21■□□□□ 0.03
CDH4P55283 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH4P55283 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH4P55283 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH4P55283 AC104982.3-201ENST00000581995 514 ntBASIC15.21■□□□□ 0.03
CDH4P55283 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH4P55283 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms