Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 AC144831.1-201ENST00000573312 2656 ntBASIC13.5□□□□□ -0.25
CASP6P55212 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 AC067750.1-201ENST00000608826 6545 ntBASIC13.5□□□□□ -0.25
CASP6P55212 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CASP6P55212 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 FTLP1-201ENST00000449155 526 ntBASIC13.5□□□□□ -0.25
CASP6P55212 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 AC100850.1-201ENST00000506768 649 ntBASIC13.5□□□□□ -0.25
CASP6P55212 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 AC100827.2-201ENST00000563214 1194 ntBASIC13.5□□□□□ -0.25
CASP6P55212 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CASP6P55212 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.5□□□□□ -0.25
CASP6P55212 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CASP6P55212 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
CASP6P55212 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CASP6P55212 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.49□□□□□ -0.25
CASP6P55212 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CASP6P55212 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.49□□□□□ -0.25
CASP6P55212 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 AC007686.3-201ENST00000619017 3487 ntBASIC13.49□□□□□ -0.25
CASP6P55212 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 FKBP4P6-201ENST00000457486 1332 ntBASIC13.49□□□□□ -0.25
CASP6P55212 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.49□□□□□ -0.25
CASP6P55212 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.49□□□□□ -0.25
CASP6P55212 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.49□□□□□ -0.25
CASP6P55212 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.49□□□□□ -0.25
CASP6P55212 FAM58BP-201ENST00000439056 645 ntBASIC13.49□□□□□ -0.25
CASP6P55212 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.49□□□□□ -0.25
CASP6P55212 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.49□□□□□ -0.25
CASP6P55212 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CASP6P55212 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.49□□□□□ -0.25
CASP6P55212 IMP3P2-201ENST00000489760 475 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms