Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.37□□□□□ -0.11
EPHA4P54764 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 AC016700.1-201ENST00000429424 312 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 NKAIN1P1-201ENST00000435754 582 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 GCOM2-201ENST00000509133 1104 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA4P54764 AC131206.1-201ENST00000538078 1211 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 AC013355.1-201ENST00000562625 723 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.37□□□□□ -0.11
EPHA4P54764 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 AC132192.2-201ENST00000596206 1147 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 AL136295.7-201ENST00000619226 1200 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.37□□□□□ -0.11
EPHA4P54764 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA4P54764 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.37□□□□□ -0.11
EPHA4P54764 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EPHA4P54764 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EPHA4P54764 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA4P54764 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA4P54764 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA4P54764 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
EPHA4P54764 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA4P54764 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
EPHA4P54764 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA4P54764 AC012441.2-201ENST00000444843 739 ntBASIC14.36□□□□□ -0.11
EPHA4P54764 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.36□□□□□ -0.11
EPHA4P54764 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.36□□□□□ -0.11
EPHA4P54764 MIR4783-201ENST00000580343 82 ntBASIC14.36□□□□□ -0.11
EPHA4P54764 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA4P54764 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.36□□□□□ -0.11
EPHA4P54764 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.36□□□□□ -0.11
EPHA4P54764 AL606495.2-201ENST00000605867 535 ntBASIC14.36□□□□□ -0.11
EPHA4P54764 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 AC004923.1-202ENST00000642106 209 ntBASIC14.36□□□□□ -0.11
EPHA4P54764 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
EPHA4P54764 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EPHA4P54764 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA4P54764 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 AC126755.1-201ENST00000525846 6405 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms