Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.52□□□□□ -0.08
PDX1P52945 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDX1P52945 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.52□□□□□ -0.08
PDX1P52945 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.52□□□□□ -0.08
PDX1P52945 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDX1P52945 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 AC091046.1-201ENST00000331871 207 ntBASIC14.52□□□□□ -0.09
PDX1P52945 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 AC104457.1-201ENST00000401024 814 ntBASIC14.52□□□□□ -0.09
PDX1P52945 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 AL136309.1-201ENST00000403917 691 ntBASIC14.52□□□□□ -0.09
PDX1P52945 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PDX1P52945 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.52□□□□□ -0.09
PDX1P52945 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.52□□□□□ -0.09
PDX1P52945 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.52□□□□□ -0.09
PDX1P52945 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
PDX1P52945 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PDX1P52945 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 AC138466.3-201ENST00000619983 221 ntBASIC14.52□□□□□ -0.09
PDX1P52945 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PDX1P52945 AL603764.1-201ENST00000636452 321 ntBASIC14.52□□□□□ -0.09
PDX1P52945 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PDX1P52945 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PDX1P52945 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.52□□□□□ -0.09
PDX1P52945 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.52□□□□□ -0.09
PDX1P52945 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.52□□□□□ -0.09
PDX1P52945 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDX1P52945 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 RN7SL769P-201ENST00000469386 295 ntBASIC14.51□□□□□ -0.09
PDX1P52945 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.51□□□□□ -0.09
PDX1P52945 AC022217.1-201ENST00000521069 738 ntBASIC14.51□□□□□ -0.09
PDX1P52945 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PDX1P52945 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 DUX4L47-201ENST00000566374 394 ntBASIC14.51□□□□□ -0.09
PDX1P52945 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 AL645939.5-201ENST00000606834 243 ntBASIC14.51□□□□□ -0.09
PDX1P52945 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PDX1P52945 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.51□□□□□ -0.09
PDX1P52945 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDX1P52945 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms