Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.91□□□□□ -0.34
HCFC1P51610 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.91□□□□□ -0.34
HCFC1P51610 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.91□□□□□ -0.34
HCFC1P51610 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 AC103691.2-201ENST00000618824 433 ntBASIC12.91□□□□□ -0.34
HCFC1P51610 LINC01165-201ENST00000445190 1623 ntBASIC12.91□□□□□ -0.34
HCFC1P51610 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
HCFC1P51610 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 AC008723.1-201ENST00000506922 207 ntBASIC12.91□□□□□ -0.34
HCFC1P51610 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 MIR3188-201ENST00000583494 85 ntBASIC12.91□□□□□ -0.34
HCFC1P51610 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.91□□□□□ -0.34
HCFC1P51610 AC005618.3-201ENST00000624928 458 ntBASIC12.91□□□□□ -0.34
HCFC1P51610 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
HCFC1P51610 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HCFC1P51610 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.91□□□□□ -0.34
HCFC1P51610 AC025271.4-201ENST00000621477 1726 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HCFC1P51610 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 FAM90A2P-201ENST00000511144 1395 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 FAM90A25P-201ENST00000528404 1395 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
HCFC1P51610 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
HCFC1P51610 RN7SL258P-201ENST00000478664 300 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.9□□□□□ -0.34
HCFC1P51610 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.9□□□□□ -0.34
HCFC1P51610 POU5F1P2-201ENST00000521750 823 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.9□□□□□ -0.34
HCFC1P51610 HLA-C-210ENST00000640219 976 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HCFC1P51610 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.9□□□□□ -0.34
HCFC1P51610 AC087481.3-201ENST00000602886 1894 ntBASIC12.9□□□□□ -0.34
HCFC1P51610 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HCFC1P51610 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HCFC1P51610 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms