Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.29□□□□□ -0.28
LHX2P50458 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
LHX2P50458 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.29□□□□□ -0.28
LHX2P50458 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.29□□□□□ -0.28
LHX2P50458 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.29□□□□□ -0.28
LHX2P50458 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LHX2P50458 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LHX2P50458 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.28□□□□□ -0.28
LHX2P50458 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 RNMTL1P1-201ENST00000454103 560 ntBASIC13.28□□□□□ -0.28
LHX2P50458 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.28□□□□□ -0.28
LHX2P50458 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.28□□□□□ -0.28
LHX2P50458 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.28□□□□□ -0.28
LHX2P50458 AC103810.3-201ENST00000583567 96 ntBASIC13.28□□□□□ -0.28
LHX2P50458 AL451050.2-201ENST00000606967 682 ntBASIC13.28□□□□□ -0.28
LHX2P50458 AC244452.3-201ENST00000636814 210 ntBASIC13.28□□□□□ -0.28
LHX2P50458 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.28□□□□□ -0.28
LHX2P50458 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
LHX2P50458 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 DBET-201ENST00000630918 3363 ntBASIC13.28□□□□□ -0.28
LHX2P50458 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LHX2P50458 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
LHX2P50458 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.28□□□□□ -0.28
LHX2P50458 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LHX2P50458 AC244394.1-201ENST00000435000 1665 ntBASIC13.28□□□□□ -0.28
LHX2P50458 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
LHX2P50458 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
LHX2P50458 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LHX2P50458 AC018529.2-202ENST00000611482 3087 ntBASIC13.27□□□□□ -0.28
LHX2P50458 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LHX2P50458 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LHX2P50458 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LHX2P50458 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LHX2P50458 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LHX2P50458 NKAIN1P1-201ENST00000435754 582 ntBASIC13.27□□□□□ -0.29
LHX2P50458 AL035414.1-201ENST00000451327 857 ntBASIC13.27□□□□□ -0.29
LHX2P50458 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.27□□□□□ -0.29
LHX2P50458 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.27□□□□□ -0.29
LHX2P50458 AC044849.1-201ENST00000519737 1188 ntBASIC13.27□□□□□ -0.29
LHX2P50458 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.27□□□□□ -0.29
LHX2P50458 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.27□□□□□ -0.29
LHX2P50458 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LHX2P50458 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.27□□□□□ -0.29
LHX2P50458 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.27□□□□□ -0.29
LHX2P50458 AC005324.6-201ENST00000587972 613 ntBASIC13.27□□□□□ -0.29
LHX2P50458 AC020914.3-201ENST00000594712 304 ntBASIC13.27□□□□□ -0.29
LHX2P50458 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.27□□□□□ -0.29
LHX2P50458 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LHX2P50458 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.27□□□□□ -0.29
LHX2P50458 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LHX2P50458 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.27□□□□□ -0.29
LHX2P50458 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LHX2P50458 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.27□□□□□ -0.29
LHX2P50458 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.27□□□□□ -0.29
LHX2P50458 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
LHX2P50458 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LHX2P50458 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms