Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.09□□□□□ -0.15
GABRA4P48169 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GABRA4P48169 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 CALR4P-201ENST00000431943 946 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 FAM58BP-201ENST00000439056 645 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.09□□□□□ -0.15
GABRA4P48169 AC021723.1-201ENST00000486306 515 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.09□□□□□ -0.15
GABRA4P48169 SCARNA20.5-201ENST00000516991 142 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.09□□□□□ -0.15
GABRA4P48169 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.09□□□□□ -0.15
GABRA4P48169 AC244452.3-201ENST00000636814 210 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 AC068587.8-201ENST00000641239 219 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.09□□□□□ -0.15
GABRA4P48169 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.09□□□□□ -0.15
GABRA4P48169 AC004899.1-201ENST00000424687 1714 ntBASIC14.09□□□□□ -0.15
GABRA4P48169 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
GABRA4P48169 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GABRA4P48169 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
GABRA4P48169 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GABRA4P48169 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.08□□□□□ -0.15
GABRA4P48169 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GABRA4P48169 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
GABRA4P48169 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.08□□□□□ -0.16
GABRA4P48169 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.08□□□□□ -0.16
GABRA4P48169 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.08□□□□□ -0.16
GABRA4P48169 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 AL157407.1-201ENST00000435784 904 ntBASIC14.08□□□□□ -0.16
GABRA4P48169 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 VDAC1P1-201ENST00000439229 848 ntBASIC14.08□□□□□ -0.16
GABRA4P48169 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.08□□□□□ -0.16
GABRA4P48169 HIST2H2BC-201ENST00000498492 580 ntBASIC14.08□□□□□ -0.16
GABRA4P48169 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.08□□□□□ -0.16
GABRA4P48169 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.08□□□□□ -0.16
GABRA4P48169 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 AC004923.1-202ENST00000642106 209 ntBASIC14.08□□□□□ -0.16
GABRA4P48169 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 AC092135.3-201ENST00000624151 1846 ntBASIC14.08□□□□□ -0.16
GABRA4P48169 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
GABRA4P48169 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GABRA4P48169 AL136172.1-201ENST00000598590 1394 ntBASIC14.08□□□□□ -0.16
GABRA4P48169 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 AL136379.1-201ENST00000623471 2642 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms