Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX2-1P43699 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
NKX2-1P43699 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX2-1P43699 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-1P43699 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-1P43699 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-1P43699 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
NKX2-1P43699 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.31□□□□□ -0.44
NKX2-1P43699 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NKX2-1P43699 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX2-1P43699 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-1P43699 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 TMEM198B-204ENST00000484016 896 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-1P43699 AC140113.2-201ENST00000604370 208 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 AC074044.1-201ENST00000609673 707 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX2-1P43699 AC090505.1-201ENST00000430515 1834 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 AC099521.3-201ENST00000624251 2938 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NKX2-1P43699 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 TCAM1P-207ENST00000485295 1537 ntBASIC12.31□□□□□ -0.44
NKX2-1P43699 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-1P43699 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NKX2-1P43699 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-1P43699 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-1P43699 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 COL6A4P2-202ENST00000504443 2753 ntBASIC12.3□□□□□ -0.44
NKX2-1P43699 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 AC005562.1-201ENST00000583030 3219 ntBASIC12.3□□□□□ -0.44
NKX2-1P43699 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
NKX2-1P43699 MIR193BHG-211ENST00000641433 5365 ntBASIC12.3□□□□□ -0.44
NKX2-1P43699 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.3□□□□□ -0.44
NKX2-1P43699 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NKX2-1P43699 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 AC074338.1-201ENST00000416825 156 ntBASIC12.3□□□□□ -0.44
NKX2-1P43699 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 SLC25A1P1-201ENST00000528351 927 ntBASIC12.3□□□□□ -0.44
NKX2-1P43699 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.3□□□□□ -0.44
NKX2-1P43699 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
NKX2-1P43699 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-1P43699 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-1P43699 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-1P43699 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms