Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 AL133338.1-201ENST00000565695 1517 ntBASIC13.74□□□□□ -0.21
RFC3P40938 AC015818.8-201ENST00000587907 1519 ntBASIC13.74□□□□□ -0.21
RFC3P40938 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 AC139749.1-202ENST00000617529 3139 ntBASIC13.74□□□□□ -0.21
RFC3P40938 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 CLUHP2-201ENST00000426660 1303 ntBASIC13.74□□□□□ -0.21
RFC3P40938 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.74□□□□□ -0.21
RFC3P40938 BCYRN1-201ENST00000418539 200 ntBASIC13.74□□□□□ -0.21
RFC3P40938 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.74□□□□□ -0.21
RFC3P40938 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.74□□□□□ -0.21
RFC3P40938 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.74□□□□□ -0.21
RFC3P40938 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 AC112693.3-201ENST00000624819 1983 ntBASIC13.74□□□□□ -0.21
RFC3P40938 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RFC3P40938 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.74□□□□□ -0.21
RFC3P40938 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFC3P40938 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RFC3P40938 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 AC104457.1-201ENST00000401024 814 ntBASIC13.73□□□□□ -0.21
RFC3P40938 GPAA1P2-201ENST00000417923 928 ntBASIC13.73□□□□□ -0.21
RFC3P40938 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.73□□□□□ -0.21
RFC3P40938 GHSR-202ENST00000427970 912 ntBASIC13.73□□□□□ -0.21
RFC3P40938 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 AC006033.1-201ENST00000440505 426 ntBASIC13.73□□□□□ -0.21
RFC3P40938 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.73□□□□□ -0.21
RFC3P40938 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.73□□□□□ -0.21
RFC3P40938 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 RN7SL713P-201ENST00000582127 302 ntBASIC13.73□□□□□ -0.21
RFC3P40938 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.73□□□□□ -0.21
RFC3P40938 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 AL008638.5-201ENST00000623814 1298 ntBASIC13.73□□□□□ -0.21
RFC3P40938 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms