Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.51■□□□□ 0.55
RFC4P35249 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC4P35249 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC4P35249 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC4P35249 AL139008.1-201ENST00000437894 228 ntBASIC18.51■□□□□ 0.55
RFC4P35249 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.51■□□□□ 0.55
RFC4P35249 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RFC4P35249 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC4P35249 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC4P35249 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC4P35249 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC4P35249 AC138701.2-201ENST00000553634 226 ntBASIC18.51■□□□□ 0.55
RFC4P35249 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC4P35249 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.51■□□□□ 0.55
RFC4P35249 AC005041.3-201ENST00000606287 649 ntBASIC18.51■□□□□ 0.55
RFC4P35249 AP000322.3-201ENST00000608665 388 ntBASIC18.51■□□□□ 0.55
RFC4P35249 AC138466.5-201ENST00000624002 808 ntBASIC18.51■□□□□ 0.55
RFC4P35249 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
RFC4P35249 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC4P35249 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC4P35249 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFC4P35249 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC4P35249 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RFC4P35249 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFC4P35249 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.5■□□□□ 0.55
RFC4P35249 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.5■□□□□ 0.55
RFC4P35249 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RFC4P35249 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC4P35249 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC4P35249 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.5■□□□□ 0.55
RFC4P35249 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.5■□□□□ 0.55
RFC4P35249 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.5■□□□□ 0.55
RFC4P35249 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 HERC2P11-201ENST00000562845 725 ntBASIC18.5■□□□□ 0.55
RFC4P35249 AC100756.2-201ENST00000569537 736 ntBASIC18.5■□□□□ 0.55
RFC4P35249 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.5■□□□□ 0.55
RFC4P35249 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.5■□□□□ 0.55
RFC4P35249 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC4P35249 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC4P35249 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RFC4P35249 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 LINC01815-202ENST00000641468 1409 ntBASIC18.49■□□□□ 0.55
RFC4P35249 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.49■□□□□ 0.55
RFC4P35249 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC4P35249 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RFC4P35249 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.49■□□□□ 0.55
RFC4P35249 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.49■□□□□ 0.55
RFC4P35249 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC4P35249 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.49■□□□□ 0.55
RFC4P35249 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.49■□□□□ 0.55
RFC4P35249 AC006158.1-201ENST00000610661 249 ntBASIC18.49■□□□□ 0.55
RFC4P35249 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC4P35249 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFC4P35249 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC4P35249 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC4P35249 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 327 ms