Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN3P26045 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN3P26045 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN3P26045 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN3P26045 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN3P26045 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PTPN3P26045 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 AC092933.1-201ENST00000393644 945 ntBASIC15.23■□□□□ 0.03
PTPN3P26045 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.23■□□□□ 0.03
PTPN3P26045 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 AC025279.2-201ENST00000569730 653 ntBASIC15.23■□□□□ 0.03
PTPN3P26045 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 IGHV3-72-202ENST00000621503 303 ntBASIC15.23■□□□□ 0.03
PTPN3P26045 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.23■□□□□ 0.03
PTPN3P26045 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PTPN3P26045 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 AL136172.1-201ENST00000598590 1394 ntBASIC15.23■□□□□ 0.03
PTPN3P26045 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTPN3P26045 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTPN3P26045 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN3P26045 AC020910.5-201ENST00000623668 1865 ntBASIC15.23■□□□□ 0.03
PTPN3P26045 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 AC092135.3-201ENST00000624151 1846 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 COX5BP8-201ENST00000416911 349 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 TTTY23B-201ENST00000442790 549 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 BCRP2-202ENST00000447763 634 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 BCRP6-201ENST00000510112 632 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 BCRP7-201ENST00000511549 544 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN3P26045 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.22■□□□□ 0.03
PTPN3P26045 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 CU639417.3-201ENST00000624240 1404 ntBASIC15.22■□□□□ 0.03
PTPN3P26045 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTPN3P26045 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.22■□□□□ 0.03
PTPN3P26045 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
PTPN3P26045 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN3P26045 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms