Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AC241585.1-201ENST00000433527 519 ntBASIC13.94□□□□□ -0.18
TNFRSF1BP20333 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AC015911.4-201ENST00000588022 1070 ntBASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AL691403.2-201ENST00000618460 490 ntBASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AL390754.1-201ENST00000619088 582 ntBASIC13.94□□□□□ -0.18
TNFRSF1BP20333 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFRSF1BP20333 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC107918.4-201ENST00000641966 3141 ntBASIC13.93□□□□□ -0.18
TNFRSF1BP20333 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFRSF1BP20333 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms