Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CXCL3P19876 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CXCL3P19876 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 HSPA8P5-201ENST00000456928 2069 ntBASIC12.57□□□□□ -0.4
CXCL3P19876 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CXCL3P19876 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL3P19876 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 AL139010.1-201ENST00000454878 894 ntBASIC12.56□□□□□ -0.4
CXCL3P19876 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.56□□□□□ -0.4
CXCL3P19876 OR7E14P-202ENST00000530490 1290 ntBASIC12.56□□□□□ -0.4
CXCL3P19876 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.56□□□□□ -0.4
CXCL3P19876 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.56□□□□□ -0.4
CXCL3P19876 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.56□□□□□ -0.4
CXCL3P19876 AL645728.2-202ENST00000641679 227 ntBASIC12.56□□□□□ -0.4
CXCL3P19876 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL3P19876 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL3P19876 POM121L14P-201ENST00000406100 1558 ntBASIC12.56□□□□□ -0.4
CXCL3P19876 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL3P19876 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CXCL3P19876 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CXCL3P19876 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.55□□□□□ -0.4
CXCL3P19876 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.55□□□□□ -0.4
CXCL3P19876 AC108073.2-201ENST00000464002 357 ntBASIC12.55□□□□□ -0.4
CXCL3P19876 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.55□□□□□ -0.4
CXCL3P19876 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CXCL3P19876 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.55□□□□□ -0.4
CXCL3P19876 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.55□□□□□ -0.4
CXCL3P19876 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms