Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 MIR645-201ENST00000385283 94 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 AL161932.2-201ENST00000435436 679 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 AC138701.2-201ENST00000553634 226 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 SORD2P-201ENST00000558556 1069 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.56■□□□□ 0.24
COL11A1P12107 MIR4649-201ENST00000582839 64 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 MIR2392-201ENST00000584881 84 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
COL11A1P12107 AC007326.1-201ENST00000604539 458 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.56■□□□□ 0.24
COL11A1P12107 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.56■□□□□ 0.24
COL11A1P12107 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 CR383656.3-201ENST00000551315 183 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.56■□□□□ 0.24
COL11A1P12107 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
COL11A1P12107 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.56■□□□□ 0.24
COL11A1P12107 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 AL591471.1-201ENST00000621855 229 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 AC067931.2-201ENST00000623655 2003 ntBASIC16.56■□□□□ 0.24
COL11A1P12107 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.56■□□□□ 0.24
COL11A1P12107 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
COL11A1P12107 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.56■□□□□ 0.24
COL11A1P12107 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL11A1P12107 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
COL11A1P12107 LINC01815-202ENST00000641468 1409 ntBASIC16.55■□□□□ 0.24
COL11A1P12107 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.55■□□□□ 0.24
COL11A1P12107 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.55■□□□□ 0.24
COL11A1P12107 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.55■□□□□ 0.24
COL11A1P12107 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.55■□□□□ 0.24
COL11A1P12107 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.55■□□□□ 0.24
COL11A1P12107 MIR3180-2-201ENST00000581748 88 ntBASIC16.55■□□□□ 0.24
COL11A1P12107 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.55■□□□□ 0.24
COL11A1P12107 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.55■□□□□ 0.24
COL11A1P12107 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COL11A1P12107 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.55■□□□□ 0.24
COL11A1P12107 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.55■□□□□ 0.24
COL11A1P12107 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.55■□□□□ 0.24
COL11A1P12107 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL11A1P12107 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.55■□□□□ 0.24
COL11A1P12107 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.55■□□□□ 0.24
COL11A1P12107 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.54■□□□□ 0.24
COL11A1P12107 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.54■□□□□ 0.24
COL11A1P12107 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.54■□□□□ 0.24
COL11A1P12107 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.54■□□□□ 0.24
COL11A1P12107 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
COL11A1P12107 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.54■□□□□ 0.24
COL11A1P12107 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.54■□□□□ 0.24
COL11A1P12107 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.54■□□□□ 0.24
COL11A1P12107 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.54■□□□□ 0.24
COL11A1P12107 AC140658.4-201ENST00000561990 352 ntBASIC16.54■□□□□ 0.24
COL11A1P12107 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.54■□□□□ 0.24
COL11A1P12107 AC087392.5-201ENST00000612517 489 ntBASIC16.54■□□□□ 0.24
COL11A1P12107 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.54■□□□□ 0.24
COL11A1P12107 AC092384.3-202ENST00000564646 2873 ntBASIC16.54■□□□□ 0.24
COL11A1P12107 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 LAP3P2-201ENST00000454686 1454 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms