Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.39□□□□□ -0.11
SP9P0CG40 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 AC092862.1-201ENST00000541534 533 ntBASIC14.39□□□□□ -0.11
SP9P0CG40 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.39□□□□□ -0.11
SP9P0CG40 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.39□□□□□ -0.11
SP9P0CG40 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.39□□□□□ -0.11
SP9P0CG40 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.39□□□□□ -0.11
SP9P0CG40 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SP9P0CG40 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.39□□□□□ -0.11
SP9P0CG40 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP9P0CG40 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SP9P0CG40 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SP9P0CG40 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 RN7SL767P-201ENST00000493013 295 ntBASIC14.38□□□□□ -0.11
SP9P0CG40 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
SP9P0CG40 RN7SL564P-201ENST00000496309 250 ntBASIC14.38□□□□□ -0.11
SP9P0CG40 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.38□□□□□ -0.11
SP9P0CG40 AC080080.1-201ENST00000625121 2420 ntBASIC14.38□□□□□ -0.11
SP9P0CG40 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 AC105250.1-201ENST00000509378 2057 ntBASIC14.38□□□□□ -0.11
SP9P0CG40 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.38□□□□□ -0.11
SP9P0CG40 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
SP9P0CG40 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP9P0CG40 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SP9P0CG40 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SP9P0CG40 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SP9P0CG40 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SP9P0CG40 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.37□□□□□ -0.11
SP9P0CG40 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.37□□□□□ -0.11
SP9P0CG40 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SP9P0CG40 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SP9P0CG40 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SP9P0CG40 AP000354.1-201ENST00000396982 456 ntBASIC14.37□□□□□ -0.11
SP9P0CG40 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.37□□□□□ -0.11
SP9P0CG40 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms