Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.56□□□□□ -0.4
SIX6O95475 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SIX6O95475 AC072061.1-201ENST00000569710 2234 ntBASIC12.56□□□□□ -0.4
SIX6O95475 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SIX6O95475 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 PRSS29P-201ENST00000440800 595 ntBASIC12.55□□□□□ -0.4
SIX6O95475 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.55□□□□□ -0.4
SIX6O95475 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.55□□□□□ -0.4
SIX6O95475 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.55□□□□□ -0.4
SIX6O95475 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SIX6O95475 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SIX6O95475 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.55□□□□□ -0.4
SIX6O95475 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SIX6O95475 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SIX6O95475 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SIX6O95475 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SIX6O95475 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SIX6O95475 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.54□□□□□ -0.4
SIX6O95475 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.54□□□□□ -0.4
SIX6O95475 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.54□□□□□ -0.4
SIX6O95475 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.54□□□□□ -0.4
SIX6O95475 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
SIX6O95475 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.54□□□□□ -0.4
SIX6O95475 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.54□□□□□ -0.4
SIX6O95475 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.54□□□□□ -0.4
SIX6O95475 AC012640.2-201ENST00000561606 901 ntBASIC12.54□□□□□ -0.4
SIX6O95475 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.54□□□□□ -0.4
SIX6O95475 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.54□□□□□ -0.4
SIX6O95475 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.54□□□□□ -0.4
SIX6O95475 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SIX6O95475 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms