Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.75■□□□□ 0.43
MBD4O95243 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
MBD4O95243 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MBD4O95243 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD4O95243 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
MBD4O95243 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD4O95243 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MBD4O95243 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
MBD4O95243 MTHFR-210ENST00000641407 2387 ntBASIC17.75■□□□□ 0.43
MBD4O95243 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD4O95243 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD4O95243 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD4O95243 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD4O95243 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.74■□□□□ 0.43
MBD4O95243 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD4O95243 KLF2P1-201ENST00000447438 1042 ntBASIC17.74■□□□□ 0.43
MBD4O95243 RNMTL1P1-201ENST00000454103 560 ntBASIC17.74■□□□□ 0.43
MBD4O95243 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD4O95243 AC100827.2-201ENST00000563214 1194 ntBASIC17.74■□□□□ 0.43
MBD4O95243 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 AC008825.2-201ENST00000603374 718 ntBASIC17.74■□□□□ 0.43
MBD4O95243 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.74■□□□□ 0.43
MBD4O95243 AC244093.1-201ENST00000610837 814 ntBASIC17.74■□□□□ 0.43
MBD4O95243 MIR6787-201ENST00000616675 61 ntBASIC17.74■□□□□ 0.43
MBD4O95243 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD4O95243 AC244394.1-201ENST00000435000 1665 ntBASIC17.74■□□□□ 0.43
MBD4O95243 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD4O95243 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MBD4O95243 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
MBD4O95243 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MBD4O95243 GPAA1P2-201ENST00000417923 928 ntBASIC17.73■□□□□ 0.43
MBD4O95243 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.73■□□□□ 0.43
MBD4O95243 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 AC021723.1-201ENST00000486306 515 ntBASIC17.73■□□□□ 0.43
MBD4O95243 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.73■□□□□ 0.43
MBD4O95243 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD4O95243 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MBD4O95243 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD4O95243 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms