Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 BX640514.1-201ENST00000583223 1918 ntBASIC17.39■□□□□ 0.37
CDKL5O76039 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDKL5O76039 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.38■□□□□ 0.37
CDKL5O76039 AC015802.1-201ENST00000588104 1449 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDKL5O76039 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.38■□□□□ 0.37
CDKL5O76039 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 AL365209.1-201ENST00000624418 6473 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.38■□□□□ 0.37
CDKL5O76039 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.38■□□□□ 0.37
CDKL5O76039 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDKL5O76039 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDKL5O76039 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.38■□□□□ 0.37
CDKL5O76039 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CDKL5O76039 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.38■□□□□ 0.37
CDKL5O76039 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 AP005018.1-201ENST00000525475 301 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.38■□□□□ 0.37
CDKL5O76039 SLC25A47P1-201ENST00000531577 414 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.38■□□□□ 0.37
CDKL5O76039 AC025279.2-201ENST00000569730 653 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 AC233724.13-201ENST00000598383 410 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 AL022328.1-201ENST00000610050 478 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDKL5O76039 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.38■□□□□ 0.37
CDKL5O76039 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDKL5O76039 AL136172.1-201ENST00000598590 1394 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 AGGF1P1-201ENST00000509500 2073 ntBASIC17.38■□□□□ 0.37
CDKL5O76039 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDKL5O76039 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDKL5O76039 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 RN7SKP230-201ENST00000365642 335 ntBASIC17.37■□□□□ 0.37
CDKL5O76039 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.37■□□□□ 0.37
CDKL5O76039 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.37■□□□□ 0.37
CDKL5O76039 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.37■□□□□ 0.37
CDKL5O76039 USP32P1-208ENST00000506594 1164 ntBASIC17.37■□□□□ 0.37
CDKL5O76039 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDKL5O76039 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 GNRHR2-203ENST00000581100 1187 ntBASIC17.37■□□□□ 0.37
CDKL5O76039 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 AC008735.3-201ENST00000596646 500 ntBASIC17.37■□□□□ 0.37
CDKL5O76039 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.37■□□□□ 0.37
CDKL5O76039 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDKL5O76039 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.37■□□□□ 0.37
CDKL5O76039 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.37■□□□□ 0.37
CDKL5O76039 MRPL37P1-201ENST00000592451 1337 ntBASIC17.37■□□□□ 0.37
CDKL5O76039 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.37■□□□□ 0.37
CDKL5O76039 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDKL5O76039 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDKL5O76039 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms