Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.26□□□□□ -0.45
SSSCA1O60232 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SSSCA1O60232 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 SPDYE17-201ENST00000412399 783 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 KRT18P56-201ENST00000507275 550 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.26□□□□□ -0.45
SSSCA1O60232 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SSSCA1O60232 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 BANF1P1-201ENST00000553684 263 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.26□□□□□ -0.45
SSSCA1O60232 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.26□□□□□ -0.45
SSSCA1O60232 AC145285.3-201ENST00000564603 959 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 RN7SL510P-201ENST00000581311 263 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SSSCA1O60232 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 AC092902.6-201ENST00000641783 218 ntBASIC12.26□□□□□ -0.45
SSSCA1O60232 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSSCA1O60232 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SSSCA1O60232 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSSCA1O60232 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSSCA1O60232 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 AC090505.1-201ENST00000430515 1834 ntBASIC12.25□□□□□ -0.45
SSSCA1O60232 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 PCDHA5-203ENST00000614258 4248 ntBASIC12.25□□□□□ -0.45
SSSCA1O60232 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 FAAHP1-202ENST00000446499 1238 ntBASIC12.25□□□□□ -0.45
SSSCA1O60232 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
SSSCA1O60232 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.25□□□□□ -0.45
SSSCA1O60232 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 RNA5SP416-201ENST00000516838 111 ntBASIC12.25□□□□□ -0.45
SSSCA1O60232 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms