Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SLC25A6P4-201ENST00000586535 553 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 AC026120.1-201ENST00000611536 926 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 SPDYE10P-202ENST00000612005 668 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 SPDYE8P-202ENST00000612377 668 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 AC138969.3-201ENST00000546612 1459 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 AC138932.2-201ENST00000548268 1459 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 AC126755.4-201ENST00000549796 1459 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.28□□□□□ -0.6
SNAI2O43623 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 TARDBPP1-201ENST00000442013 1203 ntBASIC11.28□□□□□ -0.6
SNAI2O43623 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
SNAI2O43623 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.28□□□□□ -0.6
SNAI2O43623 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.28□□□□□ -0.6
SNAI2O43623 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SNAI2O43623 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AC092865.6-201ENST00000642101 219 ntBASIC11.28□□□□□ -0.6
SNAI2O43623 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AC083964.2-201ENST00000623988 2396 ntBASIC11.28□□□□□ -0.6
SNAI2O43623 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AC092135.3-201ENST00000624151 1846 ntBASIC11.28□□□□□ -0.6
SNAI2O43623 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNAI2O43623 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.28□□□□□ -0.6
SNAI2O43623 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
SNAI2O43623 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.27□□□□□ -0.6
SNAI2O43623 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
SNAI2O43623 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.27□□□□□ -0.6
SNAI2O43623 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNAI2O43623 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.6
SNAI2O43623 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.27□□□□□ -0.6
SNAI2O43623 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.27□□□□□ -0.6
SNAI2O43623 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.27□□□□□ -0.6
SNAI2O43623 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms