Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RNF13O43567 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF13O43567 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.68□□□□□ -0.22
RNF13O43567 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.68□□□□□ -0.22
RNF13O43567 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF13O43567 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.68□□□□□ -0.22
RNF13O43567 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF13O43567 AC093726.1-201ENST00000608064 963 ntBASIC13.68□□□□□ -0.22
RNF13O43567 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 AJ011932.1-201ENST00000621707 465 ntBASIC13.68□□□□□ -0.22
RNF13O43567 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF13O43567 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RNF13O43567 AL645937.2-201ENST00000396808 931 ntBASIC13.67□□□□□ -0.22
RNF13O43567 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 NUS1P3-201ENST00000423502 862 ntBASIC13.67□□□□□ -0.22
RNF13O43567 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 DFFBP1-201ENST00000433250 979 ntBASIC13.67□□□□□ -0.22
RNF13O43567 SPTLC1P1-201ENST00000447199 261 ntBASIC13.67□□□□□ -0.22
RNF13O43567 TSPY16P-201ENST00000449843 468 ntBASIC13.67□□□□□ -0.22
RNF13O43567 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 SERBP1P5-201ENST00000510079 1181 ntBASIC13.67□□□□□ -0.22
RNF13O43567 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.67□□□□□ -0.22
RNF13O43567 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF13O43567 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF13O43567 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF13O43567 BRI3BPP1-201ENST00000594224 787 ntBASIC13.67□□□□□ -0.22
RNF13O43567 AC099568.2-201ENST00000609194 695 ntBASIC13.67□□□□□ -0.22
RNF13O43567 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 BX539320.1-201ENST00000623759 877 ntBASIC13.67□□□□□ -0.22
RNF13O43567 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 AC152010.1-201ENST00000415779 2006 ntBASIC13.67□□□□□ -0.22
RNF13O43567 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF13O43567 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 AC007541.1-201ENST00000570282 1469 ntBASIC13.67□□□□□ -0.22
RNF13O43567 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF13O43567 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF13O43567 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms