Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 KRT8P22-201ENST00000562317 1415 ntBASIC15.03■□□□□ -0
TRIM49D1C9J1S8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AL645937.2-201ENST00000396808 931 ntBASIC15.03■□□□□ -0
TRIM49D1C9J1S8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AC107890.1-201ENST00000422478 521 ntBASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AC134684.3-201ENST00000641758 218 ntBASIC15.03■□□□□ -0
TRIM49D1C9J1S8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 AC100757.3-201ENST00000622361 1406 ntBASIC15.02■□□□□ -0
TRIM49D1C9J1S8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 INE2-201ENST00000630399 1874 ntBASIC15.02■□□□□ -0
TRIM49D1C9J1S8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 AC026410.3-201ENST00000514280 936 ntBASIC15.02■□□□□ -0
TRIM49D1C9J1S8 AC092865.5-201ENST00000545435 363 ntBASIC15.02■□□□□ -0
TRIM49D1C9J1S8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM49D1C9J1S8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM49D1C9J1S8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM49D1C9J1S8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms