Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AHCYP4-201ENST00000419201 1315 ntBASIC13□□□□□ -0.33
MBD3L3A6NE82 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13□□□□□ -0.33
MBD3L3A6NE82 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L3A6NE82 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L3A6NE82 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
MBD3L3A6NE82 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13□□□□□ -0.33
MBD3L3A6NE82 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L3A6NE82 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13□□□□□ -0.33
MBD3L3A6NE82 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 MIR3907-201ENST00000579424 151 ntBASIC13□□□□□ -0.33
MBD3L3A6NE82 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13□□□□□ -0.33
MBD3L3A6NE82 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13□□□□□ -0.33
MBD3L3A6NE82 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
MBD3L3A6NE82 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
MBD3L3A6NE82 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MBD3L3A6NE82 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13□□□□□ -0.33
MBD3L3A6NE82 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 KRT18P36-201ENST00000411618 1276 ntBASIC12.99□□□□□ -0.33
MBD3L3A6NE82 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC242376.1-201ENST00000559033 726 ntBASIC12.99□□□□□ -0.33
MBD3L3A6NE82 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 MIR4754-201ENST00000582477 89 ntBASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.99□□□□□ -0.33
MBD3L3A6NE82 AC023157.3-201ENST00000619086 2088 ntBASIC12.98□□□□□ -0.33
MBD3L3A6NE82 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.98□□□□□ -0.33
MBD3L3A6NE82 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MBD3L3A6NE82 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MBD3L3A6NE82 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MBD3L3A6NE82 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.98□□□□□ -0.33
MBD3L3A6NE82 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MBD3L3A6NE82 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms