Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AC009549.1-201ENST00000603468 1686 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 LINC01165-201ENST00000445190 1623 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AC011840.2-201ENST00000563063 1520 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AL445250.1-201ENST00000641671 2259 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 BX276092.2-201ENST00000417668 665 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 MFAP1P1-201ENST00000442257 1255 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 RPS2P4-201ENST00000476944 856 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AC092666.2-201ENST00000613287 246 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 MIR6786-201ENST00000616843 113 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AP001350.2-201ENST00000625104 1094 ntBASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
LINC01558Q9Y6Z2 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms