Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.74■□□□□ 0.27
COL4A3BPQ9Y5P4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 MIR1908-201ENST00000410394 80 ntBASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 POM121L8P-201ENST00000417732 1281 ntBASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 POM121L9P-203ENST00000441984 1285 ntBASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AC018529.2-202ENST00000611482 3087 ntBASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AC018442.1-201ENST00000421439 2061 ntBASIC16.73■□□□□ 0.27
COL4A3BPQ9Y5P4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AC140479.7-201ENST00000636301 2332 ntBASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 FAM86MP-201ENST00000340703 885 ntBASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms