Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 RPS9P1-201ENST00000419943 583 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 RPL23AP68-201ENST00000480924 445 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AC116345.2-201ENST00000512837 523 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 RNU6-467P-201ENST00000517027 110 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AC013355.1-201ENST00000562625 723 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AC018695.6-201ENST00000614011 534 ntBASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX6Q9UPM6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC092171.3-201ENST00000610122 2651 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 FAM204CP-201ENST00000424489 642 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 USP9YP28-201ENST00000435142 589 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 VN1R110P-201ENST00000438988 971 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 SLED1-202ENST00000512051 380 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 MTND2P38-201ENST00000522536 667 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 OR4A48P-201ENST00000531359 391 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC012158.2-201ENST00000536546 354 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 SNRPGP1-201ENST00000553864 222 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC096947.1-201ENST00000603233 470 ntBASIC14.38□□□□□ -0.11
LHX6Q9UPM6 AC107373.2-201ENST00000607735 490 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms