Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 MIR1247-201ENST00000408206 136 ntBASIC14.96□□□□□ -0.01
SPASTQ9UBP0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 MTX1P1-201ENST00000440904 838 ntBASIC14.96□□□□□ -0.01
SPASTQ9UBP0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPASTQ9UBP0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 GPAA1P2-201ENST00000417923 928 ntBASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AC245100.3-201ENST00000441281 285 ntBASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AC104306.2-201ENST00000451877 341 ntBASIC14.95□□□□□ -0.02
SPASTQ9UBP0 KRT8P13-201ENST00000463294 1010 ntBASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AC015818.8-201ENST00000587907 1519 ntBASIC14.95□□□□□ -0.02
SPASTQ9UBP0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.95□□□□□ -0.02
SPASTQ9UBP0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms