Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDH9Q9HC56 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 BEND3P1-201ENST00000421591 1944 ntBASIC15.47■□□□□ 0.07
PCDH9Q9HC56 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 COX20P2-201ENST00000452636 358 ntBASIC15.47■□□□□ 0.07
PCDH9Q9HC56 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AC005840.4-201ENST00000541242 2494 ntBASIC15.47■□□□□ 0.07
PCDH9Q9HC56 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 DUX4L47-201ENST00000566374 394 ntBASIC15.47■□□□□ 0.07
PCDH9Q9HC56 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 AL358472.5-202ENST00000641448 1267 ntBASIC15.47■□□□□ 0.07
PCDH9Q9HC56 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH9Q9HC56 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 RN7SL752P-201ENST00000463779 287 ntBASIC15.46■□□□□ 0.07
PCDH9Q9HC56 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AL596325.1-201ENST00000563991 1082 ntBASIC15.46■□□□□ 0.07
PCDH9Q9HC56 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 LINC02084-201ENST00000606069 1096 ntBASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 AC005252.2-201ENST00000624630 1141 ntBASIC15.46■□□□□ 0.07
PCDH9Q9HC56 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.46■□□□□ 0.07
PCDH9Q9HC56 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDH9Q9HC56 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH9Q9HC56 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH9Q9HC56 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH9Q9HC56 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDH9Q9HC56 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms