Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 AC112504.1-201ENST00000623415 1841 ntBASIC17.43■□□□□ 0.38
EFCC1Q9HA90 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 MIR1227-201ENST00000408484 88 ntBASIC17.43■□□□□ 0.38
EFCC1Q9HA90 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 ISCA2P1-201ENST00000425548 448 ntBASIC17.43■□□□□ 0.38
EFCC1Q9HA90 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 AC090857.1-201ENST00000527400 390 ntBASIC17.43■□□□□ 0.38
EFCC1Q9HA90 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.43■□□□□ 0.38
EFCC1Q9HA90 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 PUDPP3-201ENST00000445368 636 ntBASIC17.42■□□□□ 0.38
EFCC1Q9HA90 CTBP2P4-201ENST00000513884 920 ntBASIC17.42■□□□□ 0.38
EFCC1Q9HA90 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 AC090164.2-201ENST00000611487 516 ntBASIC17.42■□□□□ 0.38
EFCC1Q9HA90 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 AC026748.1-201ENST00000624349 3251 ntBASIC17.42■□□□□ 0.38
EFCC1Q9HA90 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 CLUHP2-201ENST00000426660 1303 ntBASIC17.42■□□□□ 0.38
EFCC1Q9HA90 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFCC1Q9HA90 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AC025271.4-201ENST00000621477 1726 ntBASIC17.41■□□□□ 0.38
EFCC1Q9HA90 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AC055811.4-201ENST00000624039 1754 ntBASIC17.41■□□□□ 0.38
EFCC1Q9HA90 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms