Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AP001267.2-201ENST00000532619 2086 ntBASIC13.91□□□□□ -0.18
POLR2J2Q9GZM3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J2Q9GZM3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AL158070.2-201ENST00000623713 1621 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 MEP1AP4-201ENST00000423244 1087 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 HLA-K-203ENST00000430151 1046 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 FAM86LP-201ENST00000478302 853 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 IGHV3-42-201ENST00000520410 361 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AC009407.1-201ENST00000568958 598 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AP001160.2-201ENST00000596071 487 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AC107373.2-201ENST00000607735 490 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 AL691403.2-201ENST00000618460 490 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 CLK3P2-201ENST00000427566 1453 ntBASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J2Q9GZM3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.9□□□□□ -0.19
POLR2J2Q9GZM3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
POLR2J2Q9GZM3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 AC135586.1-201ENST00000539323 574 ntBASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 PRSS30P-206ENST00000641773 873 ntBASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
POLR2J2Q9GZM3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms