Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 BX539320.1-201ENST00000623759 877 ntBASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AC041040.2-201ENST00000622926 2899 ntBASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 MSTO2P-201ENST00000314835 1709 ntBASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AC005229.1-201ENST00000392885 409 ntBASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 KRT18P25-201ENST00000508931 1278 ntBASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AC104989.1-201ENST00000519711 778 ntBASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AP001889.1-201ENST00000525414 633 ntBASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 MIR6752-201ENST00000618442 71 ntBASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PCGF1Q9BSM1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
PCGF1Q9BSM1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PCGF1Q9BSM1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
PCGF1Q9BSM1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
PCGF1Q9BSM1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PCGF1Q9BSM1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms