Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.59■□□□□ 0.09
SMOQ99835 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.59■□□□□ 0.09
SMOQ99835 AC243960.2-201ENST00000600996 747 ntBASIC15.59■□□□□ 0.09
SMOQ99835 AL022328.3-201ENST00000607943 679 ntBASIC15.59■□□□□ 0.09
SMOQ99835 AC022748.3-201ENST00000621828 275 ntBASIC15.59■□□□□ 0.09
SMOQ99835 AC244394.1-201ENST00000435000 1665 ntBASIC15.59■□□□□ 0.09
SMOQ99835 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
SMOQ99835 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SMOQ99835 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
SMOQ99835 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SMOQ99835 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SMOQ99835 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SMOQ99835 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SMOQ99835 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SMOQ99835 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.58■□□□□ 0.08
SMOQ99835 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SMOQ99835 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.58■□□□□ 0.08
SMOQ99835 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.58■□□□□ 0.08
SMOQ99835 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.58■□□□□ 0.08
SMOQ99835 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SMOQ99835 AC103988.2-201ENST00000561804 725 ntBASIC15.58■□□□□ 0.08
SMOQ99835 AC100827.2-201ENST00000563214 1194 ntBASIC15.58■□□□□ 0.08
SMOQ99835 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.58■□□□□ 0.08
SMOQ99835 AL354702.1-201ENST00000442006 1960 ntBASIC15.58■□□□□ 0.08
SMOQ99835 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SMOQ99835 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SMOQ99835 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SMOQ99835 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.58■□□□□ 0.08
SMOQ99835 AL590440.2-201ENST00000641973 1595 ntBASIC15.58■□□□□ 0.08
SMOQ99835 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SMOQ99835 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SMOQ99835 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 MIR1247-201ENST00000408206 136 ntBASIC15.57■□□□□ 0.08
SMOQ99835 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 RNMTL1P1-201ENST00000454103 560 ntBASIC15.57■□□□□ 0.08
SMOQ99835 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.57■□□□□ 0.08
SMOQ99835 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.57■□□□□ 0.08
SMOQ99835 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
SMOQ99835 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SMOQ99835 KRT8P29-201ENST00000420409 1371 ntBASIC15.57■□□□□ 0.08
SMOQ99835 AC020907.1-201ENST00000616460 1350 ntBASIC15.57■□□□□ 0.08
SMOQ99835 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMOQ99835 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.57■□□□□ 0.08
SMOQ99835 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms