Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC136475.9-201ENST00000605240 497 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC064801.2-201ENST00000625052 1303 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC079944.2-201ENST00000478867 734 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 RN7SL553P-201ENST00000482215 298 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CYP4F10P-201ENST00000589560 752 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AL136982.5-201ENST00000605222 294 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AP005018.2-201ENST00000528464 822 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 MIR4695-201ENST00000577305 74 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AP005264.5-201ENST00000590066 467 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 AC090164.3-201ENST00000610780 2143 ntBASIC4.34□□□□□ -1.71
HMCN1Q96RW7 HPX-213ENST00000615166 826 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC4.34□□□□□ -1.71
HMCN1Q96RW7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SERPINB8P1-201ENST00000401898 377 ntBASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 ALOX12P1-201ENST00000579299 1229 ntBASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC4.34□□□□□ -1.72
HMCN1Q96RW7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms