Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR1H4Q96RI1 PMS2P7-201ENST00000506558 1336 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 CICP1-201ENST00000416803 2410 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AC024075.2-201ENST00000598112 1473 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 LAGE3P1-201ENST00000425356 484 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 RPS15P9-201ENST00000494093 319 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 IFNL4P1-201ENST00000607083 540 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AL365181.3-201ENST00000605886 3222 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AC107375.1-201ENST00000564464 2231 ntBASIC14.15□□□□□ -0.14
NR1H4Q96RI1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H4Q96RI1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.15□□□□□ -0.15
NR1H4Q96RI1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NR1H4Q96RI1 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 AC072061.1-201ENST00000569710 2234 ntBASIC14.14□□□□□ -0.15
NR1H4Q96RI1 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.14□□□□□ -0.15
NR1H4Q96RI1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 AC073648.2-201ENST00000510116 352 ntBASIC14.14□□□□□ -0.15
NR1H4Q96RI1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 HNRNPUP1-201ENST00000554987 333 ntBASIC14.14□□□□□ -0.15
NR1H4Q96RI1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 CLEC4GP1-201ENST00000596555 870 ntBASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 AC107918.4-202ENST00000641623 219 ntBASIC14.14□□□□□ -0.15
NR1H4Q96RI1 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms