Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 AP000769.1-203ENST00000637245 208 ntBASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CSMD1Q96PZ7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AC021305.1-201ENST00000520656 1514 ntBASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 ACTG1P19-201ENST00000418987 1116 ntBASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AC018629.1-201ENST00000623381 1736 ntBASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 BX088651.3-201ENST00000418155 352 ntBASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD1Q96PZ7 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 KRT18P46-201ENST00000435568 1279 ntBASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 FAU-201ENST00000279259 461 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AL121949.3-201ENST00000406684 385 ntBASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AC006328.1-201ENST00000437571 379 ntBASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AL512324.3-201ENST00000619383 882 ntBASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms