Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 STYXL1-206ENST00000431581 1147 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC116347.1-201ENST00000442824 720 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 E2F6P4-201ENST00000468625 514 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC136475.9-201ENST00000605240 497 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 OR9G1-201ENST00000312153 918 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC004884.1-201ENST00000393647 319 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 HNRNPA1P27-201ENST00000412087 955 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TUBB8P9-201ENST00000422534 1276 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TUBB8P10-201ENST00000430210 1279 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 VDAC1P11-201ENST00000458323 852 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 MIR4309-201ENST00000582498 83 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 SLC9A7P1-202ENST00000556476 2239 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 NOS2P3-201ENST00000411468 867 ntBASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE2Q8WXH0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 FAM90A22P-201ENST00000400142 1395 ntBASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 PHBP10-201ENST00000416467 784 ntBASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 AL390726.1-201ENST00000451357 202 ntBASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 RN7SL665P-201ENST00000578793 300 ntBASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 AC079602.2-201ENST00000538389 283 ntBASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 AC092471.1-202ENST00000637160 999 ntBASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE2Q8WXH0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms