Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 OR2I1P-209ENST00000641730 5365 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AC015656.1-201ENST00000624209 3578 ntBASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AC114812.1-204ENST00000449669 728 ntBASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AC004066.1-201ENST00000502488 802 ntBASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 DUX4L45-201ENST00000566406 1057 ntBASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 MIR6869-201ENST00000619434 62 ntBASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AC132938.4-201ENST00000623835 848 ntBASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDND2Q8NHS1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 SBF1P1-201ENST00000444527 5631 ntBASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AC006001.1-201ENST00000325130 474 ntBASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 PFN1P12-201ENST00000455938 534 ntBASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AL590640.2-201ENST00000457038 527 ntBASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 RPL13AP20-201ENST00000459725 609 ntBASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDND2Q8NHS1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms