Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 ABCD1P4-201ENST00000399687 604 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 EEF1DP2-201ENST00000433698 843 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 HNRNPA3P6-201ENST00000472163 1006 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 AC108724.1-201ENST00000481669 352 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 RN7SL602P-201ENST00000578326 324 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 RN7SL718P-201ENST00000581254 303 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 RN7SL121P-201ENST00000584223 273 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 AC126755.5-201ENST00000622756 267 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 AL139384.1-201ENST00000612143 3047 ntBASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 URB1-AS1-201ENST00000534991 831 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AC005777.1-201ENST00000588332 187 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AC010531.8-201ENST00000623341 685 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AC139713.2-207ENST00000641556 1292 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 AC093300.1-201ENST00000510368 1201 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 MIR2278-201ENST00000516344 96 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 CSTP2-201ENST00000610599 398 ntBASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL22A1Q8NFW1 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 RHOQP2-201ENST00000449922 579 ntBASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 AC025594.1-201ENST00000469533 543 ntBASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 MIR4265-201ENST00000582152 99 ntBASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms