Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC106794.1-201ENST00000506935 792 ntBASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 AC020658.6-201ENST00000623564 1870 ntBASIC15.23■□□□□ 0.03
CHPFQ8IZ52 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHPFQ8IZ52 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 RN7SKP175-201ENST00000408472 289 ntBASIC15.22■□□□□ 0.03
CHPFQ8IZ52 CYP46A4P-201ENST00000414953 267 ntBASIC15.22■□□□□ 0.03
CHPFQ8IZ52 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 RNMTL1P1-201ENST00000454103 560 ntBASIC15.22■□□□□ 0.03
CHPFQ8IZ52 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHPFQ8IZ52 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC020910.5-201ENST00000623668 1865 ntBASIC15.21■□□□□ 0.03
CHPFQ8IZ52 INE2-201ENST00000630399 1874 ntBASIC15.21■□□□□ 0.03
CHPFQ8IZ52 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms