Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF135Q8IUD6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 RN7SL181P-201ENST00000462921 277 ntBASIC15.9■□□□□ 0.14
RNF135Q8IUD6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AL023803.2-201ENST00000620080 638 ntBASIC15.9■□□□□ 0.14
RNF135Q8IUD6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF135Q8IUD6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC023824.1-201ENST00000562945 2975 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC022532.1-201ENST00000624563 1728 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 MYO15B-237ENST00000642007 4893 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 RN7SL8P-201ENST00000461771 266 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC019193.1-201ENST00000506678 823 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC106794.1-201ENST00000506935 792 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC013355.1-201ENST00000562625 723 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AL353770.1-201ENST00000614915 403 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AC022748.3-201ENST00000621828 275 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AP001002.3-201ENST00000623482 206 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 AL805961.1-203ENST00000641078 1258 ntBASIC15.89■□□□□ 0.13
RNF135Q8IUD6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF135Q8IUD6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms