Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 KLF2P2-201ENST00000416807 1039 ntBASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AC112492.5-201ENST00000421897 457 ntBASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.84□□□□□ -0.19
ZNF550Q7Z398 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 AL033527.5-201ENST00000641382 801 ntBASIC13.84□□□□□ -0.19
ZNF550Q7Z398 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 LRRC59-203ENST00000576448 1531 ntBASIC13.84□□□□□ -0.19
ZNF550Q7Z398 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF550Q7Z398 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZNF550Q7Z398 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.83□□□□□ -0.19
ZNF550Q7Z398 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ZNF550Q7Z398 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 ACKR1-201ENST00000368121 1240 ntBASIC13.83□□□□□ -0.2
ZNF550Q7Z398 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AL162726.2-201ENST00000438986 1017 ntBASIC13.83□□□□□ -0.2
ZNF550Q7Z398 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 KRT18P25-201ENST00000508931 1278 ntBASIC13.83□□□□□ -0.2
ZNF550Q7Z398 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 KRT17P8-201ENST00000540749 863 ntBASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AC017083.2-201ENST00000608069 979 ntBASIC13.83□□□□□ -0.2
ZNF550Q7Z398 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 AC005089.1-201ENST00000619486 2241 ntBASIC13.83□□□□□ -0.2
ZNF550Q7Z398 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF550Q7Z398 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.82□□□□□ -0.2
ZNF550Q7Z398 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms